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USC-OGP 2-DE database

Two-dimensional polyacrylamide gel electrophoresis database


USC-OGP 2-DE database 
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Searching in 'USC-OGP 2-DE database' for entry matching: RBMX_HUMAN




USC-OGP 2-DE database:  RBMX_HUMAN


RBMX_HUMAN


General information about the entry
View entry in simple text format
Entry nameRBMX_HUMAN
Primary accession numberP38159
integrated into USC-OGP 2-DE database on January 17, 2017 (release 1)
2D Annotations were last modified onJanuary 17, 2017 (version 1)
General Annotations were last modified on April 5, 2017 (version 2)
Name and origin of the protein
DescriptionRecName: Full=RNA-binding motif protein, X chromosome; AltName: Full=Glycoprotein p43; AltName: Full=Heterogeneous nuclear ribonucleoprotein G; Short=hnRNP G; Contains: RecName: Full=RNA-binding motif protein, X chromosome, N-terminally processed;.
Gene nameName=RBMX
Synonyms=HNRPG, RBMXP1
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein

UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10}
Homo sapiens (Human)
UVEAL_MELANOMA_3-10
  map experimental info
 
UVEAL_MELANOMA_3-10

MAP LOCATIONS:
pI=5.40; Mw=44276

Cross-references
UniProtKB/Swiss-ProtP38159; RBMX_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry nameRBMX_HUMAN
Primary accession numberP38159
Secondary accession number(s) B4E3U4 D3DWH0 E9PG86 Q5JQ67 Q8N8Y7 Q969R3
Sequence was last modified on September 19, 2002 (version 3)
Annotations were last modified on March 15, 2017 (version 191)
Name and origin of the protein
DescriptionRecName: Full=RNA-binding motif protein, X chromosome; AltName: Full=Glycoprotein p43; AltName: Full=Heterogeneous nuclear ribonucleoprotein G; Short=hnRNP G; Contains: RecName: Full=RNA-binding motif protein, X chromosome, N-terminally processed;
Gene nameName=RBMX
Synonyms=HNRPG, RBMXP1
Encoded onName=RBMX; Synonyms=HNRPG, RBMXP1
Keywords3D-structure; Acetylation; Activator; Alternative splicing; Complete proteome; Direct protein sequencing; Glycoprotein; Isopeptide bond; Mental retardation; Methylation; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repressor; Ribonucleoprotein; RNA-binding; Spliceosome; Transcription; Tumor suppressor; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLZ23064; CAA80599.1; -; mRNA
EMBLAF266723; AAK58567.1; -; Genomic_DNA
EMBLAF266720; AAK58567.1; JOINED; Genomic_DNA
EMBLAF266721; AAK58567.1; JOINED; Genomic_DNA
EMBLAF266722; AAK58567.1; JOINED; Genomic_DNA
EMBLAY464692; AAR28036.1; -; mRNA
EMBLAK096015; BAC04674.1; -; mRNA
EMBLAK304868; BAG65606.1; -; mRNA
EMBLAL683813; CAI39448.1; -; Genomic_DNA
EMBLCH471150; EAW88453.1; -; Genomic_DNA
EMBLCH471150; EAW88454.1; -; Genomic_DNA
EMBLCH471150; EAW88455.1; -; Genomic_DNA
EMBLCH471150; EAW88457.1; -; Genomic_DNA
EMBLBC006550; AAH06550.1; -; mRNA
EMBLBC007435; AAH07435.1; -; mRNA
CCDSCCDS14661.1; -. [P38159-1]; .
CCDSCCDS55510.1; -. [P38159-3]; .
RefSeqNP_001158275.1; NM_001164803.1. [P38159-3]; .
RefSeqNP_002130.2; NM_002139.3. [P38159-1]; .
UniGeneHs.380118; -; .
UniGeneHs.710162; -; .
PDB2MB0; NMR; -; B=1-95
PDB2MKS; NMR; -; A=1-90
PDBsum2MB0; -; .
PDBsum2MKS; -; .
ProteinModelPortalP38159; -; .
SMRP38159; -; .
BioGrid118134; 155; .
DIPDIP-34447N; -; .
IntActP38159; 95; .
MINTMINT-5000999; -; .
STRING9606.ENSP00000359645; -; .
iPTMnetP38159; -; .
PhosphoSitePlusP38159; -; .
SwissPalmP38159; -; .
BioMutaRBMX; -; .
DMDM23503093; -; .
SWISS-2DPAGEP38159; -; .
EPDP38159; -; .
MaxQBP38159; -; .
PaxDbP38159; -; .
PeptideAtlasP38159; -; .
PRIDEP38159; -; .
TopDownProteomicsP38159-1; -. [P38159-1]; .
DNASU27316; -; .
EnsemblENST00000320676; ENSP00000359645; ENSG00000147274. [P38159-1]; .
EnsemblENST00000431446; ENSP00000411989; ENSG00000147274. [P38159-3]; .
GeneID27316; -; .
KEGGhsa:27316; -; .
UCSCuc004fae.4; human. [P38159-1]; .
CTD27316; -; .
DisGeNET27316; -; .
GeneCardsRBMX; -; .
HGNCHGNC:9910; RBMX; .
HPAHPA057707; -; .
MIM300199; gene; .
MIM300238; phenotype; .
neXtProtNX_P38159; -; .
OpenTargetsENSG00000147274; -; .
PharmGKBPA34277; -; .
eggNOGENOG410IHG3; Eukaryota; .
eggNOGENOG4111GI6; LUCA; .
GeneTreeENSGT00710000106295; -; .
HOGENOMHOG000276235; -; .
HOVERGENHBG063314; -; .
InParanoidP38159; -; .
KOK12885; -; .
OMARDYSYRE; -; .
OrthoDBEOG091G13K0; -; .
PhylomeDBP38159; -; .
TreeFamTF331833; -; .
ReactomeR-HSA-72163; mRNA Splicing - Major Pathway; .
ReactomeR-HSA-72203; Processing of Capped Intron-Containing Pre-mRNA; .
ChiTaRSRBMX; human; .
GeneWikiRBMX; -; .
GenomeRNAi27316; -; .
PROPR:P38159; -; .
ProteomesUP000005640; Chromosome X; .
BgeeENSG00000147274; -; .
CleanExHS_RBMX; -; .
ExpressionAtlasP38159; baseline and differential; .
GenevisibleP38159; HS; .
GOGO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB; .
GOGO:0070062; C:extracellular exosome; IDA:UniProtKB; .
GOGO:0005615; C:extracellular space; IDA:UniProtKB; .
GOGO:0030529; C:intracellular ribonucleoprotein complex; NAS:UniProtKB; .
GOGO:0016020; C:membrane; IDA:UniProtKB; .
GOGO:0005719; C:nuclear euchromatin; IDA:UniProtKB; .
GOGO:0005654; C:nucleoplasm; TAS:Reactome; .
GOGO:0005634; C:nucleus; IDA:UniProtKB; .
GOGO:0044530; C:supraspliceosomal complex; IDA:UniProtKB; .
GOGO:0003682; F:chromatin binding; IDA:UniProtKB; .
GOGO:0001047; F:core promoter binding; IDA:UniProtKB; .
GOGO:0042802; F:identical protein binding; IPI:IntAct; .
GOGO:0003729; F:mRNA binding; IDA:UniProtKB; .
GOGO:0000166; F:nucleotide binding; IEA:InterPro; .
GOGO:0003723; F:RNA binding; IDA:UniProtKB; .
GOGO:0071347; P:cellular response to interleukin-1; IDA:UniProtKB; .
GOGO:0010467; P:gene expression; TAS:Reactome; .
GOGO:0006509; P:membrane protein ectodomain proteolysis; IDA:UniProtKB; .
GOGO:0000398; P:mRNA splicing; via spliceosome; IC:UniProtKB
GOGO:0048025; P:negative regulation of mRNA splicing; via spliceosome; ISS:UniProtKB
GOGO:0001649; P:osteoblast differentiation; IDA:UniProtKB; .
GOGO:0048026; P:positive regulation of mRNA splicing; via spliceosome; ISS:UniProtKB
GOGO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB; .
GOGO:0051260; P:protein homooligomerization; ISS:UniProtKB; .
GOGO:0000381; P:regulation of alternative mRNA splicing; via spliceosome; IDA:UniProtKB
GOGO:0006366; P:transcription from RNA polymerase II promoter; IDA:UniProtKB; .
Gene3D3.30.70.330; -; 1; .
InterProIPR012677; Nucleotide-bd_a/b_plait; .
InterProIPR012604; RBM1CTR; .
InterProIPR000504; RRM_dom; .
InterProIPR003954; RRM_dom_euk; .
PfamPF08081; RBM1CTR; 1; .
PfamPF00076; RRM_1; 1; .
SMARTSM00360; RRM; 1; .
SMARTSM00361; RRM_1; 1; .
SUPFAMSSF54928; SSF54928; 1; .
PROSITEPS50102; RRM; 1; .



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Database constructed and maintained by Angel Garcia, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server

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